BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018E05LP1|AL427327
(869 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1494 1699 0.0
>3x_Contig1494
Length = 10561
Score = 1699 bits (855), Expect = 0.0
Identities = 865/869 (99%), Gaps = 1/869 (0%)
Strand = Plus / Minus
Query: 1 attaataagttaacttacaacaacaaagcggcas-accggcgaccaaagcaccagcagct 59
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 5714 attaataagttaacttacaacaacaaagcggcagcaccggcgaccaaagcaccagcagct 5655
Query: 60 ggcaaagccttagcagctgcaccagtgtaatctggttgagtgtgagaagtggatggagct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5654 ggcaaagccttagcagctgcaccagtgtaatctggttgagtgtgagaagtggatggagct 5595
Query: 120 ggagcagcagtagaagtggtgttcttttcaactggagcttcagtggttggtagtggacac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5594 ggagcagcagtagaagtggtgttcttttcaactggagcttcagtggttggtagtggacac 5535
Query: 180 caggtggtgtattcggtgatgacgtcgttgacggtgacggtagcagtagagaccaaagct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5534 caggtggtgtattcggtgatgacgtcgttgacggtgacggtagcagtagagaccaaagct 5475
Query: 240 tcagaaacggattcgctacatttgttttcttcacaagaagtgatggtaaccaaagtagtt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5474 tcagaaacggattcgctacatttgttttcttcacaagaagtgatggtaaccaaagtagtt 5415
Query: 300 tgggattcggtagcggtttcagtggtgatgttttgagcggaggcaacggcggcaacggcg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5414 tgggattcggtagcggtttcagtggtgatgttttgagcggaggcaacggcggcaacggcg 5355
Query: 360 gcgaaagcggcgacagtagagaattgcatttttgataagtatttaagcgagtgactgaag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5354 gcgaaagcggcgacagtagagaattgcatttttgataagtatttaagcgagtgactgaag 5295
Query: 420 aataatattctatgaggttttaagctaaaaatgaatatagtaaaattattataataatag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5294 aataatattctatgaggttttaagctaaaaatgaatatagtaaaattattataataatag 5235
Query: 480 tgtagaagaagagaaaagaatatattaaaatctgaatggtacctgctgtatatatactct 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5234 tgtagaagaagagaaaagaatatattaaaatctgaatggtacctgctgtatatatactct 5175
Query: 540 tttttttgcctcctccttgggtaagtttctctatttcagtagataaaaaaaaaacaataa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5174 tttttttgcctcctccttgggtaagtttctctatttcagtagataaaaaaaaaacaataa 5115
Query: 600 agcagtaatattttttatcatatctcctcataacaggaaaaatcagaaactaaggtttct 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5114 agcagtaatattttttatcatatctcctcataacaggaaaaatcagaaactaaggtttct 5055
Query: 660 aaatttgtcatttttttggccacgccccagtggccgcagtacaaatcgcgagatttgttt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5054 aaatttgtcatttttttggccacgccccagtggccgcagtacaaatcgcgagatttgttt 4995
Query: 720 gtttttggtcatgaaagaaaaaaatgaaaaataagaractaaaccaaaaaaaaaaaaacg 779
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 4994 gtttttggtcatgaaagaaaaaaatgaaaaataagaaactaaaccaaaaaaaaaaaaacg 4935
Query: 780 ccaacagtgagaacgggctttacaacggacttttacagtgggttctaaaagaggtaaaaa 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4934 ccaacagtgagaacgggctttacaacggacttttacagtgggttctaaaagaggtaaaaa 4875
Query: 840 ctagcccgtagccagcagactggtawttt 868
||||||||||||||||||||||||| |||
Sbjct: 4874 ctagcccgtagccagcagactggtatttt 4846
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,779
Number of Sequences: 1807
Number of extensions: 16779
Number of successful extensions: 238
Number of sequences better than 1.0e-20: 1
length of query: 869
length of database: 10,358,551
effective HSP length: 16
effective length of query: 853
effective length of database: 10,329,639
effective search space: 8811182067
effective search space used: 8811182067
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)